Here is an alternate way to play this song, I know this version really confusing and its 
more advanced. But it sounds pretty good if you can get it down.

Also, C#m and B are in the same shape as 3-finger power chord on the A string (Second 
string) and you strum all of the strings.

These are the chords and their frets starting from the capo:
C#m:        B:
4th fret    2nd fret

Capo 6th Fret


Verse 1:
C#m               E                         B                 
    A
Father hear my prayer I need the perfect words, words that he will hear and
                           C#m                        E
know they're straight from you. I don't know what to say I only know it
B               C#m           B       A
hurts to see my only friend slowly fade away

Chorus:
          E                         B                      
C#m   B   A
So maybe this time, I'll speak the words of life with your fire in my eyes,
                E                     B                        A
but that old familiar fear is tearin' at my words What am i so afraid of
            E                      B                     C#m  
        B
here i go again talkin' 'bout the rain and mullin' over things that won't
        A                            E                       B
live past today and as i dance around the truth time is not his friend this
             C#m            B                A                
  E
might be my last chance to tell him that you love him here i go again
        B          A
here I go again

Verse 2:
C#m                E                      B                   
   A
Lord you love him so you gave your only son if he would just believe he
            C#m                    E                     B
would never die how then will he know if he has never heard Lord he has
C#m          B            A
never seen mirrored in my life

Chorus

C#m E B A

C#m E B C#m B A

Chorus


-Thanks hope you enjoy it!