I'm almost positive this isn't exactly how it's played on the album or in anything else 
that matter, but it works for me. So I thought it might work for some others as well. 
A and E may actually be right though?)
Also: It helps to change up the D with a Dadd9 (xx0230) and Dsus4 (xx0233) randomly at will.

Standard Tuning - EADGBE

 A            E
You left me there waiting
        D
at the bottom of the stairs

with my eyes closed

 A          E
Holding my right hand
   D
in my left.
         F        E   A        E
There is no time for hesitation now.
     D                 A
You come or go, or go.

Rust suddenly falling
beside me on the ghost
of a morning.
Riding in sorrow
to the harbor.
Far behind, oh me, are the bodies of my friends.
Hanging alone, alone again.

Some twisted thorn tells me
you saw me in the night
with another.
Keep all my promises
to break them.
I am no, oh no, innocent son.
You run, rabbit run.


Hope this helps at least SOMEbody.
Karchie